Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
SftpbP50405 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
SftpbP50405 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.07■□□□□ 0.48
SftpbP50405 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SftpbP50405 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SftpbP50405 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SftpbP50405 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SftpbP50405 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.06■□□□□ 0.48
SftpbP50405 Gm8969-201ENSMUST00000199694 526 ntBASIC18.06■□□□□ 0.48
SftpbP50405 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.06■□□□□ 0.48
SftpbP50405 Gm6365-201ENSMUST00000054711 744 ntBASIC18.06■□□□□ 0.48
SftpbP50405 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.06■□□□□ 0.48
SftpbP50405 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SftpbP50405 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SftpbP50405 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SftpbP50405 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.05■□□□□ 0.48
SftpbP50405 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SftpbP50405 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SftpbP50405 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.05■□□□□ 0.48
SftpbP50405 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SftpbP50405 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SftpbP50405 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SftpbP50405 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.05■□□□□ 0.48
SftpbP50405 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SftpbP50405 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.05■□□□□ 0.48
SftpbP50405 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SftpbP50405 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SftpbP50405 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
SftpbP50405 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SftpbP50405 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SftpbP50405 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SftpbP50405 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
SftpbP50405 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SftpbP50405 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SftpbP50405 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.03■□□□□ 0.48
SftpbP50405 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.03■□□□□ 0.48
SftpbP50405 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SftpbP50405 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SftpbP50405 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.03■□□□□ 0.48
SftpbP50405 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SftpbP50405 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.03■□□□□ 0.48
SftpbP50405 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.03■□□□□ 0.48
SftpbP50405 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SftpbP50405 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SftpbP50405 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SftpbP50405 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SftpbP50405 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SftpbP50405 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SftpbP50405 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SftpbP50405 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.02■□□□□ 0.48
SftpbP50405 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.02■□□□□ 0.48
SftpbP50405 Gm7291-201ENSMUST00000199147 382 ntBASIC18.02■□□□□ 0.48
SftpbP50405 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.02■□□□□ 0.48
SftpbP50405 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SftpbP50405 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SftpbP50405 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SftpbP50405 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SftpbP50405 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SftpbP50405 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SftpbP50405 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SftpbP50405 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms