Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.19□□□□□ -0.46
Smim1P0C8K7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Gm45444-201ENSMUST00000211394 898 ntBASIC12.19□□□□□ -0.46
Smim1P0C8K7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim1P0C8K7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Gm7860-201ENSMUST00000121190 879 ntBASIC12.18□□□□□ -0.46
Smim1P0C8K7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.18□□□□□ -0.46
Smim1P0C8K7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.18□□□□□ -0.46
Smim1P0C8K7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim1P0C8K7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.17□□□□□ -0.46
Smim1P0C8K7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smim1P0C8K7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Smim1P0C8K7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms