Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxc8P09025 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxc8P09025 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxc8P09025 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.89■□□□□ 0.61
Hoxc8P09025 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hoxc8P09025 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc8P09025 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.88■□□□□ 0.61
Hoxc8P09025 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.88■□□□□ 0.61
Hoxc8P09025 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.88■□□□□ 0.61
Hoxc8P09025 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc8P09025 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.87■□□□□ 0.61
Hoxc8P09025 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hoxc8P09025 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.87■□□□□ 0.61
Hoxc8P09025 Gm27704-201ENSMUST00000185094 107 ntBASIC18.87■□□□□ 0.61
Hoxc8P09025 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.87■□□□□ 0.61
Hoxc8P09025 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.87■□□□□ 0.61
Hoxc8P09025 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc8P09025 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
Hoxc8P09025 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc8P09025 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.86■□□□□ 0.61
Hoxc8P09025 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Hoxc8P09025 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.86■□□□□ 0.61
Hoxc8P09025 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Gm10566-201ENSMUST00000086739 996 ntBASIC18.86■□□□□ 0.61
Hoxc8P09025 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc8P09025 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc8P09025 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc8P09025 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxc8P09025 Actl10-202ENSMUST00000226583 1501 ntBASIC18.85■□□□□ 0.61
Hoxc8P09025 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Hoxc8P09025 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxc8P09025 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Gm11355-201ENSMUST00000121120 306 ntBASIC18.85■□□□□ 0.61
Hoxc8P09025 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Gm17808-201ENSMUST00000200859 894 ntBASIC18.85■□□□□ 0.61
Hoxc8P09025 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxc8P09025 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxc8P09025 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc8P09025 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxc8P09025 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.84■□□□□ 0.61
Hoxc8P09025 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.84■□□□□ 0.61
Hoxc8P09025 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Gm26039-201ENSMUST00000158152 144 ntBASIC18.84■□□□□ 0.61
Hoxc8P09025 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Fst-202ENSMUST00000223640 2612 ntBASIC18.84■□□□□ 0.61
Hoxc8P09025 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc8P09025 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms