Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa1P09022 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa1P09022 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa1P09022 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxa1P09022 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.41□□□□□ -0.1
Hoxa1P09022 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxa1P09022 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxa1P09022 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxa1P09022 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxa1P09022 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Hoxa1P09022 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa1P09022 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxa1P09022 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxa1P09022 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Hoxa1P09022 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa1P09022 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Hoxa1P09022 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.39□□□□□ -0.11
Hoxa1P09022 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.39□□□□□ -0.11
Hoxa1P09022 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxa1P09022 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxa1P09022 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxa1P09022 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxa1P09022 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa1P09022 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Hoxa1P09022 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa1P09022 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa1P09022 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa1P09022 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Hoxa1P09022 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxa1P09022 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxa1P09022 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa1P09022 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa1P09022 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxa1P09022 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms