Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Gm37055-201ENSMUST00000191866 133 ntBASIC14.79□□□□□ -0.04
Hoxa3P02831 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa3P02831 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa3P02831 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxa3P02831 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.78□□□□□ -0.04
Hoxa3P02831 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hoxa3P02831 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa3P02831 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.77□□□□□ -0.04
Hoxa3P02831 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Hoxa3P02831 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa3P02831 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hoxa3P02831 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hoxa3P02831 Gm15565-201ENSMUST00000118890 427 ntBASIC14.77□□□□□ -0.05
Hoxa3P02831 Mir5122-201ENSMUST00000175004 89 ntBASIC14.77□□□□□ -0.05
Hoxa3P02831 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.77□□□□□ -0.05
Hoxa3P02831 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.77□□□□□ -0.05
Hoxa3P02831 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxa3P02831 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hoxa3P02831 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hoxa3P02831 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hoxa3P02831 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.76□□□□□ -0.05
Hoxa3P02831 Gm37292-201ENSMUST00000192062 758 ntBASIC14.76□□□□□ -0.05
Hoxa3P02831 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.76□□□□□ -0.05
Hoxa3P02831 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hoxa3P02831 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hoxa3P02831 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxa3P02831 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.75□□□□□ -0.05
Hoxa3P02831 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hoxa3P02831 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.75□□□□□ -0.05
Hoxa3P02831 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hoxa3P02831 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hoxa3P02831 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.75□□□□□ -0.05
Hoxa3P02831 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.75□□□□□ -0.05
Hoxa3P02831 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hoxa3P02831 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.75□□□□□ -0.05
Hoxa3P02831 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.75□□□□□ -0.05
Hoxa3P02831 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxa3P02831 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxa3P02831 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms