Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.25■□□□□ 0.51
CopeO89079 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CopeO89079 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.24■□□□□ 0.51
CopeO89079 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CopeO89079 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CopeO89079 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.24■□□□□ 0.51
CopeO89079 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CopeO89079 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CopeO89079 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.23■□□□□ 0.51
CopeO89079 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CopeO89079 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CopeO89079 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CopeO89079 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CopeO89079 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.22■□□□□ 0.51
CopeO89079 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CopeO89079 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CopeO89079 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.21■□□□□ 0.51
CopeO89079 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.21■□□□□ 0.51
CopeO89079 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CopeO89079 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CopeO89079 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.21■□□□□ 0.51
CopeO89079 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CopeO89079 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.21■□□□□ 0.5
CopeO89079 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.2■□□□□ 0.5
CopeO89079 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.2■□□□□ 0.5
CopeO89079 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CopeO89079 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.2■□□□□ 0.5
CopeO89079 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CopeO89079 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.19■□□□□ 0.5
CopeO89079 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CopeO89079 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CopeO89079 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CopeO89079 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CopeO89079 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.18■□□□□ 0.5
CopeO89079 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.18■□□□□ 0.5
CopeO89079 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CopeO89079 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.18■□□□□ 0.5
CopeO89079 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.18■□□□□ 0.5
CopeO89079 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.18■□□□□ 0.5
CopeO89079 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms