Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.63□□□□□ -0.23
Gm10226O88253 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.63□□□□□ -0.23
Gm10226O88253 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.63□□□□□ -0.23
Gm10226O88253 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gm10226O88253 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm10226O88253 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm10226O88253 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm10226O88253 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Gm10226O88253 Gm15565-201ENSMUST00000118890 427 ntBASIC13.62□□□□□ -0.23
Gm10226O88253 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm10226O88253 Gm24841-201ENSMUST00000158676 357 ntBASIC13.62□□□□□ -0.23
Gm10226O88253 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Gm38027-201ENSMUST00000192315 235 ntBASIC13.62□□□□□ -0.23
Gm10226O88253 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gm10226O88253 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gm10226O88253 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm10226O88253 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm10226O88253 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Gm10226O88253 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm10226O88253 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.61□□□□□ -0.23
Gm10226O88253 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.61□□□□□ -0.23
Gm10226O88253 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Mir8112-201ENSMUST00000184382 131 ntBASIC13.61□□□□□ -0.23
Gm10226O88253 Gm30025-201ENSMUST00000218555 728 ntBASIC13.61□□□□□ -0.23
Gm10226O88253 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm10226O88253 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm10226O88253 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Gm10226O88253 Mir7071-201ENSMUST00000184847 69 ntBASIC13.6□□□□□ -0.23
Gm10226O88253 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gm10226O88253 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.6□□□□□ -0.23
Gm10226O88253 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm10226O88253 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm10226O88253 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.59□□□□□ -0.23
Gm10226O88253 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.59□□□□□ -0.23
Gm10226O88253 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.59□□□□□ -0.23
Gm10226O88253 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.59□□□□□ -0.23
Gm10226O88253 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm10226O88253 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gm10226O88253 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm10226O88253 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm10226O88253 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gm10226O88253 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm10226O88253 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10226O88253 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10226O88253 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm10226O88253 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10226O88253 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10226O88253 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm10226O88253 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms