Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.63□□□□□ -0.07
SncaO55042 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Nespas-201ENSMUST00000143738 1083 ntBASIC14.63□□□□□ -0.07
SncaO55042 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.63□□□□□ -0.07
SncaO55042 Gm8969-201ENSMUST00000199694 526 ntBASIC14.63□□□□□ -0.07
SncaO55042 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.63□□□□□ -0.07
SncaO55042 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.63□□□□□ -0.07
SncaO55042 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SncaO55042 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.63□□□□□ -0.07
SncaO55042 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SncaO55042 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.62□□□□□ -0.07
SncaO55042 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.62□□□□□ -0.07
SncaO55042 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.62□□□□□ -0.07
SncaO55042 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.62□□□□□ -0.07
SncaO55042 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SncaO55042 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SncaO55042 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SncaO55042 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.61□□□□□ -0.07
SncaO55042 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.61□□□□□ -0.07
SncaO55042 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.61□□□□□ -0.07
SncaO55042 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.61□□□□□ -0.07
SncaO55042 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.61□□□□□ -0.07
SncaO55042 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SncaO55042 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SncaO55042 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SncaO55042 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.61□□□□□ -0.07
SncaO55042 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.61□□□□□ -0.07
SncaO55042 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SncaO55042 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.61□□□□□ -0.07
SncaO55042 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.61□□□□□ -0.07
SncaO55042 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SncaO55042 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.6□□□□□ -0.07
SncaO55042 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Gm7514-201ENSMUST00000209475 934 ntBASIC14.6□□□□□ -0.07
SncaO55042 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SncaO55042 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.59□□□□□ -0.07
SncaO55042 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SncaO55042 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.59□□□□□ -0.07
SncaO55042 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Gm18671-201ENSMUST00000214826 683 ntBASIC14.59□□□□□ -0.07
SncaO55042 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.59□□□□□ -0.07
SncaO55042 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.59□□□□□ -0.07
SncaO55042 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SncaO55042 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SncaO55042 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SncaO55042 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.58□□□□□ -0.07
SncaO55042 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.58□□□□□ -0.08
SncaO55042 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms