Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Prom1O54990 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Prom1O54990 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prom1O54990 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prom1O54990 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Prom1O54990 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Gm27741-201ENSMUST00000185060 237 ntBASIC19.49■□□□□ 0.71
Prom1O54990 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Prom1O54990 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Prom1O54990 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prom1O54990 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.48■□□□□ 0.71
Prom1O54990 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Prom1O54990 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Prom1O54990 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Gm16061-201ENSMUST00000122167 857 ntBASIC19.48■□□□□ 0.71
Prom1O54990 Gm7284-201ENSMUST00000131667 944 ntBASIC19.48■□□□□ 0.71
Prom1O54990 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Prom1O54990 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.48■□□□□ 0.71
Prom1O54990 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.48■□□□□ 0.71
Prom1O54990 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prom1O54990 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Prom1O54990 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Prom1O54990 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.47■□□□□ 0.71
Prom1O54990 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.47■□□□□ 0.71
Prom1O54990 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prom1O54990 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.46■□□□□ 0.71
Prom1O54990 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Prom1O54990 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Prom1O54990 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Grk6-206ENSMUST00000224995 2971 ntBASIC19.46■□□□□ 0.71
Prom1O54990 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prom1O54990 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.7
Prom1O54990 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Gm17661-201ENSMUST00000170317 270 ntBASIC19.45■□□□□ 0.7
Prom1O54990 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Prom1O54990 Gm21559-201ENSMUST00000220638 855 ntBASIC19.45■□□□□ 0.7
Prom1O54990 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Prom1O54990 Gm8587-201ENSMUST00000076538 843 ntBASIC19.45■□□□□ 0.7
Prom1O54990 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.45■□□□□ 0.7
Prom1O54990 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prom1O54990 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms