Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.32■□□□□ 0.2
Capn1O35350 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Capn1O35350 Gm7977-201ENSMUST00000193787 748 ntBASIC16.32■□□□□ 0.2
Capn1O35350 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.32■□□□□ 0.2
Capn1O35350 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.32■□□□□ 0.2
Capn1O35350 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capn1O35350 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.32■□□□□ 0.2
Capn1O35350 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.32■□□□□ 0.2
Capn1O35350 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Capn1O35350 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Capn1O35350 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Capn1O35350 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.31■□□□□ 0.2
Capn1O35350 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.31■□□□□ 0.2
Capn1O35350 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Capn1O35350 Gm15565-201ENSMUST00000118890 427 ntBASIC16.31■□□□□ 0.2
Capn1O35350 Gm13836-201ENSMUST00000121159 501 ntBASIC16.31■□□□□ 0.2
Capn1O35350 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.31■□□□□ 0.2
Capn1O35350 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Capn1O35350 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.31■□□□□ 0.2
Capn1O35350 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.31■□□□□ 0.2
Capn1O35350 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capn1O35350 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
Capn1O35350 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.3■□□□□ 0.2
Capn1O35350 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Capn1O35350 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Capn1O35350 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.3■□□□□ 0.2
Capn1O35350 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capn1O35350 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
Capn1O35350 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.29■□□□□ 0.2
Capn1O35350 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.29■□□□□ 0.2
Capn1O35350 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Mir5122-201ENSMUST00000175004 89 ntBASIC16.29■□□□□ 0.2
Capn1O35350 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.29■□□□□ 0.2
Capn1O35350 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capn1O35350 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Capn1O35350 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.28■□□□□ 0.2
Capn1O35350 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Capn1O35350 Gm38285-201ENSMUST00000192928 922 ntBASIC16.28■□□□□ 0.2
Capn1O35350 Gm10138-203ENSMUST00000206952 366 ntBASIC16.28■□□□□ 0.2
Capn1O35350 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Capn1O35350 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Capn1O35350 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capn1O35350 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Capn1O35350 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms