Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf11bO08712 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf11bO08712 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf11bO08712 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gm10418-201ENSMUST00000100943 576 ntBASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gm11927-201ENSMUST00000118472 759 ntBASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf11bO08712 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tnfrsf11bO08712 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf11bO08712 Mir2861-201ENSMUST00000175539 82 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms