Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-2D3Z4R4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-2D3Z4R4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-2D3Z4R4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-2D3Z4R4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-2D3Z4R4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-2D3Z4R4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-2D3Z4R4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx6-2D3Z4R4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx6-2D3Z4R4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms