Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a4A2AX52 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a4A2AX52 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a4A2AX52 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a4A2AX52 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a4A2AX52 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a4A2AX52 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.83□□□□□ -0.04
Col6a4A2AX52 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a4A2AX52 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.82□□□□□ -0.04
Col6a4A2AX52 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.82□□□□□ -0.04
Col6a4A2AX52 Mzt1-203ENSMUST00000227948 952 ntBASIC14.82□□□□□ -0.04
Col6a4A2AX52 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Gm13474-201ENSMUST00000122466 815 ntBASIC14.82□□□□□ -0.04
Col6a4A2AX52 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a4A2AX52 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Mir1668-201ENSMUST00000184114 107 ntBASIC14.81□□□□□ -0.04
Col6a4A2AX52 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Gm17808-201ENSMUST00000200859 894 ntBASIC14.81□□□□□ -0.04
Col6a4A2AX52 Gm7791-201ENSMUST00000219066 539 ntBASIC14.81□□□□□ -0.04
Col6a4A2AX52 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a4A2AX52 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Notumos-201ENSMUST00000151998 2659 ntBASIC14.8□□□□□ -0.04
Col6a4A2AX52 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gm18115-201ENSMUST00000221209 621 ntBASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Olfr129-201ENSMUST00000122318 993 ntBASIC14.8□□□□□ -0.04
Col6a4A2AX52 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gm6443-201ENSMUST00000203599 874 ntBASIC14.8□□□□□ -0.04
Col6a4A2AX52 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a4A2AX52 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a4A2AX52 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms