Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-1A0N8R1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Gm38285-201ENSMUST00000192928 922 ntBASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-1A0N8R1 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-1A0N8R1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Gm42642-201ENSMUST00000200683 355 ntBASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav12-1A0N8R1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav12-1A0N8R1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms