Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfap99A0A140LIX9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfap99A0A140LIX9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Gm42545-201ENSMUST00000202755 922 ntBASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cfap99A0A140LIX9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfap99A0A140LIX9 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfap99A0A140LIX9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Gm38285-201ENSMUST00000192928 922 ntBASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfap99A0A140LIX9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Odf3b-204ENSMUST00000227834 930 ntBASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfap99A0A140LIX9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms