Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav4-3A0A0B4J1K1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Idnk-204ENSMUST00000226010 1898 ntBASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4-3A0A0B4J1K1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4-3A0A0B4J1K1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav4-3A0A0B4J1K1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav4-3A0A0B4J1K1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms