Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm13234-201ENSMUST00000120010 747 ntBASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sirpb1aA0A0A6YYP6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms