Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-4-dv10A0A075B651 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav4-4-dv10A0A075B651 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-4-dv10A0A075B651 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-4-dv10A0A075B651 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm6420-201ENSMUST00000193885 723 ntBASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-4-dv10A0A075B651 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms