Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Idnk-204ENSMUST00000226010 1898 ntBASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav15d-1-dv6d-1A0A075B624 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms