Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm26422-201ENSMUST00000104276 132 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm25346-201ENSMUST00000104509 128 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14382-201ENSMUST00000117374 437 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14785-201ENSMUST00000120185 539 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm12900-201ENSMUST00000120919 573 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm11321-201ENSMUST00000121257 902 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm22518-201ENSMUST00000158267 68 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24343-201ENSMUST00000158708 111 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23824-201ENSMUST00000158741 276 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7266-201ENSMUST00000187999 405 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37966-201ENSMUST00000193122 326 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm21006-201ENSMUST00000196930 667 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42999-201ENSMUST00000198049 786 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm45156-201ENSMUST00000207255 439 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm44571-201ENSMUST00000208092 533 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm8748-201ENSMUST00000211125 587 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm3266-201ENSMUST00000217832 591 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 CR974485.1-201ENSMUST00000222408 402 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 AC168062.2-201ENSMUST00000228907 422 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr519-201ENSMUST00000084752 960 ntBASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sh3rf1Q69ZI1 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Zfp389-201ENSMUST00000118425 675 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm6446-201ENSMUST00000120604 818 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm15142-201ENSMUST00000121013 856 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16373-201ENSMUST00000129517 303 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Mir1960-201ENSMUST00000157488 78 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm26162-201ENSMUST00000157793 132 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24534-201ENSMUST00000157949 291 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24359-201ENSMUST00000158418 221 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23632-201ENSMUST00000175289 125 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm6900-201ENSMUST00000178971 342 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms