Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.12□□□□□ -1.59
Upf3bQ3ULL6 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm14619-201ENSMUST00000120480 168 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm23121-201ENSMUST00000157653 173 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm16566-201ENSMUST00000160387 910 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm22355-201ENSMUST00000175531 96 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm28976-201ENSMUST00000188070 144 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf3bQ3ULL6 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm24160-201ENSMUST00000104594 126 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm14706-201ENSMUST00000117744 255 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm15493-201ENSMUST00000119461 528 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm12685-201ENSMUST00000121702 214 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm25048-201ENSMUST00000158598 91 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm26828-201ENSMUST00000180640 172 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm18330-201ENSMUST00000199246 547 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm43794-201ENSMUST00000200971 692 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm32308-201ENSMUST00000203053 280 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm8288-201ENSMUST00000223406 593 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm22220-201ENSMUST00000082671 149 ntBASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3bQ3ULL6 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm11970-201ENSMUST00000116105 320 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm14930-201ENSMUST00000118864 652 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm15745-201ENSMUST00000119807 115 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm15057-201ENSMUST00000121516 534 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm12893-201ENSMUST00000121732 275 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Upf3bQ3ULL6 Mir7006-201ENSMUST00000183624 69 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms