Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm12423-201ENSMUST00000118334 135 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm11313-201ENSMUST00000118779 432 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm11584-201ENSMUST00000120636 325 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm22177-201ENSMUST00000175002 158 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Mir6344-201ENSMUST00000183462 104 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm27690-201ENSMUST00000184596 126 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm18426-201ENSMUST00000191874 973 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm44820-201ENSMUST00000207420 396 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm25818-201ENSMUST00000083282 164 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.23□□□□□ -1.73
Nkx3-1P97436 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx3-1P97436 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm12112-201ENSMUST00000117772 231 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm12717-201ENSMUST00000118427 983 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm12752-201ENSMUST00000121657 811 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm13745-201ENSMUST00000121994 527 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm22343-201ENSMUST00000122648 286 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm24444-201ENSMUST00000157244 308 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm26828-201ENSMUST00000180640 172 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm8614-201ENSMUST00000182528 978 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm9569-201ENSMUST00000187492 787 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm21856-201ENSMUST00000187547 696 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm21735-201ENSMUST00000190360 696 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm6546-201ENSMUST00000192096 766 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm2147-201ENSMUST00000193588 639 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm2622-201ENSMUST00000200018 471 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm43968-201ENSMUST00000203388 389 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm18997-201ENSMUST00000216353 822 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms