Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col1a1P11087 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.56□□□□□ -1.52
Col1a1P11087 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.56□□□□□ -1.52
Col1a1P11087 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.56□□□□□ -1.52
Col1a1P11087 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col1a1P11087 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col1a1P11087 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col1a1P11087 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col1a1P11087 Gm12427-201ENSMUST00000117719 302 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col1a1P11087 Gm23318-201ENSMUST00000158000 108 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm24944-201ENSMUST00000158330 128 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm22501-201ENSMUST00000158981 127 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.55□□□□□ -1.52
Col1a1P11087 Gm44038-201ENSMUST00000203952 889 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm45434-201ENSMUST00000210550 293 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm45499-201ENSMUST00000211656 280 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm19134-201ENSMUST00000221203 487 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col1a1P11087 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col1a1P11087 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Col1a1P11087 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.55□□□□□ -1.52
Col1a1P11087 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col1a1P11087 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col1a1P11087 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Gm23709-201ENSMUST00000104364 130 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Gm13501-201ENSMUST00000118477 979 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.54□□□□□ -1.52
Col1a1P11087 Gm18183-201ENSMUST00000191024 615 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Gm30280-201ENSMUST00000192214 262 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Gm42999-201ENSMUST00000198049 786 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col1a1P11087 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col1a1P11087 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.54□□□□□ -1.52
Col1a1P11087 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col1a1P11087 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Col1a1P11087 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col1a1P11087 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.54□□□□□ -1.52
Col1a1P11087 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Gm15034-201ENSMUST00000120043 349 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Gm8215-201ENSMUST00000120627 990 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm23743-201ENSMUST00000157389 274 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Gm24239-201ENSMUST00000157791 255 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Gm24939-201ENSMUST00000158325 137 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm27165-201ENSMUST00000183951 232 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.53□□□□□ -1.52
Col1a1P11087 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col1a1P11087 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col1a1P11087 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Col1a1P11087 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col1a1P11087 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms