Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.66□□□□□ -1.5
Col4a1P02463 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.66□□□□□ -1.5
Col4a1P02463 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.66□□□□□ -1.5
Col4a1P02463 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.66□□□□□ -1.5
Col4a1P02463 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Col4a1P02463 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col4a1P02463 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col4a1P02463 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.66□□□□□ -1.5
Col4a1P02463 Gm25713-201ENSMUST00000158625 109 ntBASIC5.66□□□□□ -1.5
Col4a1P02463 Mir6537-201ENSMUST00000184150 110 ntBASIC5.66□□□□□ -1.5
Col4a1P02463 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.66□□□□□ -1.5
Col4a1P02463 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col4a1P02463 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col4a1P02463 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.66□□□□□ -1.5
Col4a1P02463 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col4a1P02463 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a1P02463 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a1P02463 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col4a1P02463 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Col4a1P02463 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a1P02463 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col4a1P02463 Synpr-207ENSMUST00000223583 3362 ntBASIC5.65□□□□□ -1.5
Col4a1P02463 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a1P02463 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.65□□□□□ -1.5
Col4a1P02463 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col4a1P02463 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a1P02463 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a1P02463 Gm14575-201ENSMUST00000117210 560 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm12427-201ENSMUST00000117719 302 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm11484-201ENSMUST00000119808 338 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm14784-201ENSMUST00000121604 663 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm22453-201ENSMUST00000122801 318 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.65□□□□□ -1.51
Col4a1P02463 Gm22819-201ENSMUST00000157445 303 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm27976-201ENSMUST00000183635 162 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm8498-201ENSMUST00000188227 974 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm30280-201ENSMUST00000192214 262 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm37700-201ENSMUST00000192617 965 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm45171-201ENSMUST00000206360 736 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm45458-201ENSMUST00000209900 522 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a1P02463 Gm6065-201ENSMUST00000081336 492 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Gm6043-201ENSMUST00000099961 492 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a1P02463 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col4a1P02463 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.65□□□□□ -1.51
Col4a1P02463 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col4a1P02463 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col4a1P02463 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col4a1P02463 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col4a1P02463 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a1P02463 Svet1-201ENSMUST00000209370 3940 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Gm14753-201ENSMUST00000118503 246 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm25292-201ENSMUST00000122797 322 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm17046-201ENSMUST00000168078 850 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm19807-201ENSMUST00000173971 667 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm29228-201ENSMUST00000185489 418 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Gm37881-201ENSMUST00000193001 421 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col4a1P02463 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Gm4045-201ENSMUST00000204076 310 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.64□□□□□ -1.51
Col4a1P02463 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a1P02463 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col4a1P02463 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col4a1P02463 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col4a1P02463 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col4a1P02463 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms