Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gm15681-201ENSMUST00000137501 2704 ntBASIC1.3□□□□□ -2.2
Gm4559A4IF42 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gm43099-201ENSMUST00000198943 5241 ntBASIC1.3□□□□□ -2.2
Gm4559A4IF42 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Gm4559A4IF42 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Tmem106a-202ENSMUST00000100403 2428 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Trpc4-205ENSMUST00000200048 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Gm4559A4IF42 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms