Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm43408-201ENSMUST00000198263 440 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm9038-201ENSMUST00000203400 604 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm8319-201ENSMUST00000205708 641 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Olfr151-202ENSMUST00000221099 929 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm25260-201ENSMUST00000083053 134 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm23692-201ENSMUST00000101881 160 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm14086-201ENSMUST00000117152 173 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm13172-201ENSMUST00000118685 256 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm16420-201ENSMUST00000120258 856 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm6027-201ENSMUST00000121467 756 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm26312-201ENSMUST00000157769 165 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm25907-201ENSMUST00000158486 125 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm6047-201ENSMUST00000167221 574 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm27688-201ENSMUST00000183634 91 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm28967-201ENSMUST00000187351 281 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm8282-201ENSMUST00000187559 483 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm28567-201ENSMUST00000190270 693 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm37044-201ENSMUST00000193531 693 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm38369-201ENSMUST00000195101 693 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm45422-201ENSMUST00000211476 246 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Supt4b-201ENSMUST00000214434 351 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.69□□□□□ -1.66
Cdc40Q9DC48 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm7657-201ENSMUST00000118851 666 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm12444-201ENSMUST00000121512 877 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm5699-201ENSMUST00000152491 723 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm6542-201ENSMUST00000153606 772 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm9294-201ENSMUST00000165198 789 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm17775-201ENSMUST00000198542 258 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.68□□□□□ -1.66
Cdc40Q9DC48 Gm21112-201ENSMUST00000212224 578 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms