Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Phtf1Q9QZ09 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Phtf1Q9QZ09 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Phtf1Q9QZ09 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Phtf1Q9QZ09 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Gm10252-201ENSMUST00000209541 832 ntBASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phtf1Q9QZ09 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Gm715-201ENSMUST00000117865 831 ntBASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phtf1Q9QZ09 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.42■□□□□ 0.7
Phtf1Q9QZ09 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.41■□□□□ 0.7
Phtf1Q9QZ09 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Gm10418-201ENSMUST00000100943 576 ntBASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Phtf1Q9QZ09 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Phtf1Q9QZ09 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phtf1Q9QZ09 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phtf1Q9QZ09 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.39■□□□□ 0.69
Phtf1Q9QZ09 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phtf1Q9QZ09 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.39■□□□□ 0.69
Phtf1Q9QZ09 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phtf1Q9QZ09 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Gm10517-202ENSMUST00000192970 758 ntBASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Phtf1Q9QZ09 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms