Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpf2Q9JJ80 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpf2Q9JJ80 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpf2Q9JJ80 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpf2Q9JJ80 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Mir8112-201ENSMUST00000184382 131 ntBASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpf2Q9JJ80 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Gm10033-202ENSMUST00000211874 928 ntBASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpf2Q9JJ80 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms