Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Gm44549-201ENSMUST00000208351 577 ntBASIC18.84■□□□□ 0.61
Rtn3Q9ES97 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn3Q9ES97 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn3Q9ES97 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn3Q9ES97 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rtn3Q9ES97 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn3Q9ES97 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn3Q9ES97 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rtn3Q9ES97 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn3Q9ES97 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn3Q9ES97 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn3Q9ES97 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn3Q9ES97 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Gm22325-201ENSMUST00000158904 308 ntBASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rtn3Q9ES97 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Gm12896-201ENSMUST00000118430 226 ntBASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn3Q9ES97 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn3Q9ES97 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rtn3Q9ES97 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn3Q9ES97 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn3Q9ES97 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms