Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.67■□□□□ 0.42
Snrnp48Q9D361 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp48Q9D361 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Idnk-204ENSMUST00000226010 1898 ntBASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp48Q9D361 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snrnp48Q9D361 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Snrnp48Q9D361 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Snrnp48Q9D361 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.64■□□□□ 0.42
Snrnp48Q9D361 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Gm20760-201ENSMUST00000179197 648 ntBASIC17.64■□□□□ 0.41
Snrnp48Q9D361 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.64■□□□□ 0.41
Snrnp48Q9D361 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.63■□□□□ 0.41
Snrnp48Q9D361 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snrnp48Q9D361 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snrnp48Q9D361 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms