Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Gm11927-201ENSMUST00000118472 759 ntBASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrc40Q9CRC8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrc40Q9CRC8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrc40Q9CRC8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrc40Q9CRC8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrc40Q9CRC8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrc40Q9CRC8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrc40Q9CRC8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.58■□□□□ 0.4
Lrrc40Q9CRC8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrc40Q9CRC8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Gm15039-201ENSMUST00000118914 875 ntBASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.56■□□□□ 0.4
Lrrc40Q9CRC8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms