Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Gm15375-201ENSMUST00000119510 849 ntBASIC15.5■□□□□ 0.07
Scrt1Q99M85 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.5■□□□□ 0.07
Scrt1Q99M85 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Gm10138-203ENSMUST00000206952 366 ntBASIC15.5■□□□□ 0.07
Scrt1Q99M85 Timm23-208ENSMUST00000226683 750 ntBASIC15.5■□□□□ 0.07
Scrt1Q99M85 Odf3b-204ENSMUST00000227834 930 ntBASIC15.5■□□□□ 0.07
Scrt1Q99M85 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scrt1Q99M85 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.49■□□□□ 0.07
Scrt1Q99M85 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.49■□□□□ 0.07
Scrt1Q99M85 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Gm10013-201ENSMUST00000106074 672 ntBASIC15.48■□□□□ 0.07
Scrt1Q99M85 Gm6345-202ENSMUST00000180900 204 ntBASIC15.48■□□□□ 0.07
Scrt1Q99M85 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scrt1Q99M85 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.48■□□□□ 0.07
Scrt1Q99M85 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.47■□□□□ 0.07
Scrt1Q99M85 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.47■□□□□ 0.07
Scrt1Q99M85 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scrt1Q99M85 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms