Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Gm16061-201ENSMUST00000122167 857 ntBASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf1Q99LC2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Gm7153-201ENSMUST00000117092 455 ntBASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf1Q99LC2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf1Q99LC2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Gm27389-201ENSMUST00000183622 195 ntBASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Gm5587-201ENSMUST00000206270 674 ntBASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf1Q99LC2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf1Q99LC2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Gm13474-201ENSMUST00000122466 815 ntBASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Gm21559-201ENSMUST00000220638 855 ntBASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Gm8587-201ENSMUST00000076538 843 ntBASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cstf1Q99LC2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cstf1Q99LC2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cstf1Q99LC2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cstf1Q99LC2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cstf1Q99LC2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cstf1Q99LC2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cstf1Q99LC2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms