Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.32■□□□□ 0.52
Trim60Q8VI40 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 AV356131-201ENSMUST00000206201 750 ntBASIC18.32■□□□□ 0.52
Trim60Q8VI40 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Trim60Q8VI40 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.3■□□□□ 0.52
Trim60Q8VI40 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Gm5874-201ENSMUST00000096101 508 ntBASIC18.3■□□□□ 0.52
Trim60Q8VI40 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim60Q8VI40 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.29■□□□□ 0.52
Trim60Q8VI40 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Trim60Q8VI40 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.29■□□□□ 0.52
Trim60Q8VI40 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim60Q8VI40 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim60Q8VI40 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim60Q8VI40 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Gm7290-201ENSMUST00000104990 617 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Gm12918-201ENSMUST00000120234 636 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Gm15710-201ENSMUST00000121821 636 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim60Q8VI40 Gm5075-201ENSMUST00000196916 622 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Gm6365-201ENSMUST00000054711 744 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.27■□□□□ 0.52
Trim60Q8VI40 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim60Q8VI40 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms