Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab40cQ8VHQ4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gm8493-201ENSMUST00000196881 489 ntBASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gm43173-201ENSMUST00000202246 593 ntBASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gm45417-201ENSMUST00000209533 758 ntBASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab40cQ8VHQ4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab40cQ8VHQ4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab40cQ8VHQ4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab40cQ8VHQ4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab40cQ8VHQ4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab40cQ8VHQ4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab40cQ8VHQ4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab40cQ8VHQ4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab40cQ8VHQ4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rab40cQ8VHQ4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rab40cQ8VHQ4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rab40cQ8VHQ4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms