Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.85■□□□□ 0.45
Rpa1Q8VEE4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa1Q8VEE4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa1Q8VEE4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Gm8493-201ENSMUST00000196881 489 ntBASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Gm45417-201ENSMUST00000209533 758 ntBASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa1Q8VEE4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpa1Q8VEE4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa1Q8VEE4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Haglr-201ENSMUST00000100000 2085 ntBASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rpa1Q8VEE4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms