Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim68Q8K243 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim68Q8K243 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim68Q8K243 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim68Q8K243 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim68Q8K243 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim68Q8K243 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Trim68Q8K243 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim68Q8K243 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Trim68Q8K243 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim68Q8K243 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.18■□□□□ 0.66
Trim68Q8K243 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim68Q8K243 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim68Q8K243 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim68Q8K243 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Trim68Q8K243 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.16■□□□□ 0.66
Trim68Q8K243 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.16■□□□□ 0.66
Trim68Q8K243 Gm10138-203ENSMUST00000206952 366 ntBASIC19.16■□□□□ 0.66
Trim68Q8K243 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Zfp783-201ENSMUST00000095946 670 ntBASIC19.16■□□□□ 0.66
Trim68Q8K243 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim68Q8K243 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim68Q8K243 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.15■□□□□ 0.66
Trim68Q8K243 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.15■□□□□ 0.66
Trim68Q8K243 Gm3375-201ENSMUST00000203929 796 ntBASIC19.15■□□□□ 0.66
Trim68Q8K243 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.15■□□□□ 0.66
Trim68Q8K243 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim68Q8K243 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.15■□□□□ 0.66
Trim68Q8K243 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim68Q8K243 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.14■□□□□ 0.66
Trim68Q8K243 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim68Q8K243 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Odf3b-204ENSMUST00000227834 930 ntBASIC19.14■□□□□ 0.65
Trim68Q8K243 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim68Q8K243 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim68Q8K243 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim68Q8K243 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim68Q8K243 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim68Q8K243 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim68Q8K243 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim68Q8K243 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim68Q8K243 Gm15375-201ENSMUST00000119510 849 ntBASIC19.13■□□□□ 0.65
Trim68Q8K243 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim68Q8K243 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim68Q8K243 Gm37292-201ENSMUST00000192062 758 ntBASIC19.13■□□□□ 0.65
Trim68Q8K243 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim68Q8K243 Timm23-208ENSMUST00000226683 750 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms