Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CroccQ8CJ40 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CroccQ8CJ40 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Gm10138-203ENSMUST00000206952 366 ntBASIC16.91■□□□□ 0.3
CroccQ8CJ40 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.91■□□□□ 0.3
CroccQ8CJ40 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.91■□□□□ 0.3
CroccQ8CJ40 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CroccQ8CJ40 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Gm13401-201ENSMUST00000117074 291 ntBASIC16.9■□□□□ 0.3
CroccQ8CJ40 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.9■□□□□ 0.3
CroccQ8CJ40 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.89■□□□□ 0.29
CroccQ8CJ40 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Gm10653-202ENSMUST00000139570 835 ntBASIC16.89■□□□□ 0.29
CroccQ8CJ40 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.89■□□□□ 0.29
CroccQ8CJ40 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.89■□□□□ 0.29
CroccQ8CJ40 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Gm11643-201ENSMUST00000119578 864 ntBASIC16.88■□□□□ 0.29
CroccQ8CJ40 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CroccQ8CJ40 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Gm29791-202ENSMUST00000207888 369 ntBASIC16.87■□□□□ 0.29
CroccQ8CJ40 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CroccQ8CJ40 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms