Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhb7Q8CDY9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb7Q8CDY9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb7Q8CDY9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb7Q8CDY9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb7Q8CDY9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb7Q8CDY9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb7Q8CDY9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb7Q8CDY9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb7Q8CDY9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb7Q8CDY9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb7Q8CDY9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb7Q8CDY9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms