Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Idnk-204ENSMUST00000226010 1898 ntBASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim52Q8CDV4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim52Q8CDV4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim52Q8CDV4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Gm18101-201ENSMUST00000215769 548 ntBASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim52Q8CDV4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Gm22697-201ENSMUST00000175194 63 ntBASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Gm6345-202ENSMUST00000180900 204 ntBASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim52Q8CDV4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 AA414768-201ENSMUST00000121924 1257 ntBASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim52Q8CDV4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Gm13474-201ENSMUST00000122466 815 ntBASIC21.92■■□□□ 1.1
Trim52Q8CDV4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Trim52Q8CDV4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Mir8112-201ENSMUST00000184382 131 ntBASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Gm21362-201ENSMUST00000194272 928 ntBASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim52Q8CDV4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim52Q8CDV4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim52Q8CDV4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim52Q8CDV4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim52Q8CDV4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim52Q8CDV4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Gm17661-201ENSMUST00000170317 270 ntBASIC21.89■■□□□ 1.09
Trim52Q8CDV4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim52Q8CDV4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms