Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim35Q8C006 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim35Q8C006 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim35Q8C006 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim35Q8C006 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Trim35Q8C006 Gm11858-201ENSMUST00000117935 838 ntBASIC18.22■□□□□ 0.51
Trim35Q8C006 Gm13148-201ENSMUST00000118892 745 ntBASIC18.22■□□□□ 0.51
Trim35Q8C006 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.22■□□□□ 0.51
Trim35Q8C006 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim35Q8C006 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim35Q8C006 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim35Q8C006 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim35Q8C006 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm14301-201ENSMUST00000120181 324 ntBASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm28766-201ENSMUST00000191086 234 ntBASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm36991-201ENSMUST00000191800 648 ntBASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim35Q8C006 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim35Q8C006 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.21■□□□□ 0.51
Trim35Q8C006 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim35Q8C006 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim35Q8C006 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim35Q8C006 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC18.2■□□□□ 0.5
Trim35Q8C006 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Gm9723-201ENSMUST00000192100 457 ntBASIC18.2■□□□□ 0.5
Trim35Q8C006 Gm38170-201ENSMUST00000195404 816 ntBASIC18.2■□□□□ 0.5
Trim35Q8C006 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim35Q8C006 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim35Q8C006 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim35Q8C006 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.2■□□□□ 0.5
Trim35Q8C006 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim35Q8C006 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Trim35Q8C006 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim35Q8C006 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim35Q8C006 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Gm24590-201ENSMUST00000116699 119 ntBASIC18.19■□□□□ 0.5
Trim35Q8C006 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.19■□□□□ 0.5
Trim35Q8C006 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim35Q8C006 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim35Q8C006 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trim35Q8C006 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim35Q8C006 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim35Q8C006 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim35Q8C006 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim35Q8C006 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trim35Q8C006 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim35Q8C006 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim35Q8C006 Gm6211-202ENSMUST00000167849 925 ntBASIC18.18■□□□□ 0.5
Trim35Q8C006 Gm8902-201ENSMUST00000174341 1096 ntBASIC18.18■□□□□ 0.5
Trim35Q8C006 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.18■□□□□ 0.5
Trim35Q8C006 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim35Q8C006 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms