Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam43aQ8BUP8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Gm27405-201ENSMUST00000184201 112 ntBASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Fam43aQ8BUP8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Gm7291-201ENSMUST00000199147 382 ntBASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam43aQ8BUP8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam43aQ8BUP8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fam43aQ8BUP8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fam43aQ8BUP8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam43aQ8BUP8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.63■□□□□ 0.73
Fam43aQ8BUP8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fam43aQ8BUP8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms