Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Gm38027-201ENSMUST00000192315 235 ntBASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rd3Q8BRE0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rd3Q8BRE0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Gm4974-201ENSMUST00000209974 875 ntBASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rd3Q8BRE0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rd3Q8BRE0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rd3Q8BRE0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Mir5130-201ENSMUST00000175160 84 ntBASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Gm2274-201ENSMUST00000184539 609 ntBASIC18.76■□□□□ 0.59
Rd3Q8BRE0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rd3Q8BRE0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Gm45058-201ENSMUST00000205810 766 ntBASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.75■□□□□ 0.59
Rd3Q8BRE0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rd3Q8BRE0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rd3Q8BRE0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms