Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Gm15378-201ENSMUST00000121894 207 ntBASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sfr1Q8BP27 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sfr1Q8BP27 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sfr1Q8BP27 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sfr1Q8BP27 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sfr1Q8BP27 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Mir2861-201ENSMUST00000175539 82 ntBASIC17.92■□□□□ 0.46
Sfr1Q8BP27 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Sfr1Q8BP27 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Sfr1Q8BP27 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sfr1Q8BP27 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sfr1Q8BP27 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sfr1Q8BP27 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms