Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2bQ8BJF9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2bQ8BJF9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2bQ8BJF9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp2bQ8BJF9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.08■□□□□ 0.49
Chmp2bQ8BJF9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chmp2bQ8BJF9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chmp2bQ8BJF9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp2bQ8BJF9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2bQ8BJF9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2bQ8BJF9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms