Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Gm43672-201ENSMUST00000199072 1731 ntBASIC15□□□□□ -0.01
Upk3bQ80YF6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Upk3bQ80YF6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.98□□□□□ -0.01
Upk3bQ80YF6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Idnk-204ENSMUST00000226010 1898 ntBASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Upk3bQ80YF6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Upk3bQ80YF6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Upk3bQ80YF6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms