Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm8Q6ZWM4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm8Q6ZWM4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm8Q6ZWM4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm8Q6ZWM4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.53■□□□□ 0.56
Lsm8Q6ZWM4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm8Q6ZWM4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms