Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.97■□□□□ 0.95
Nup98Q6PFD9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.96■□□□□ 0.95
Nup98Q6PFD9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Nup98Q6PFD9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup98Q6PFD9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Gm22697-201ENSMUST00000175194 63 ntBASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup98Q6PFD9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Gm21362-201ENSMUST00000194272 928 ntBASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nup98Q6PFD9 Gm13474-201ENSMUST00000122466 815 ntBASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Gm9013-201ENSMUST00000132939 882 ntBASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Gm5587-201ENSMUST00000206270 674 ntBASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup98Q6PFD9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms