Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six4Q61321 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.86■□□□□ 0.45
Six4Q61321 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six4Q61321 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six4Q61321 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six4Q61321 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six4Q61321 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six4Q61321 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.86■□□□□ 0.45
Six4Q61321 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.86■□□□□ 0.45
Six4Q61321 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.86■□□□□ 0.45
Six4Q61321 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.85■□□□□ 0.45
Six4Q61321 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.85■□□□□ 0.45
Six4Q61321 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.85■□□□□ 0.45
Six4Q61321 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.85■□□□□ 0.45
Six4Q61321 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six4Q61321 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.85■□□□□ 0.45
Six4Q61321 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Six4Q61321 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.84■□□□□ 0.45
Six4Q61321 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.84■□□□□ 0.45
Six4Q61321 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six4Q61321 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.84■□□□□ 0.45
Six4Q61321 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Six4Q61321 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.83■□□□□ 0.45
Six4Q61321 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.83■□□□□ 0.45
Six4Q61321 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six4Q61321 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.83■□□□□ 0.45
Six4Q61321 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six4Q61321 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Six4Q61321 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Six4Q61321 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six4Q61321 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Six4Q61321 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.83■□□□□ 0.44
Six4Q61321 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six4Q61321 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Mir8112-201ENSMUST00000184382 131 ntBASIC17.82■□□□□ 0.44
Six4Q61321 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.82■□□□□ 0.44
Six4Q61321 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six4Q61321 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six4Q61321 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Six4Q61321 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.81■□□□□ 0.44
Six4Q61321 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Gm10812-201ENSMUST00000099864 546 ntBASIC17.81■□□□□ 0.44
Six4Q61321 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six4Q61321 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Six4Q61321 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.81■□□□□ 0.44
Six4Q61321 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Six4Q61321 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six4Q61321 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six4Q61321 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six4Q61321 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six4Q61321 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.8■□□□□ 0.44
Six4Q61321 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Six4Q61321 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms