Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.56■□□□□ 0.4
Col12a1Q60847 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.55■□□□□ 0.4
Col12a1Q60847 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.55■□□□□ 0.4
Col12a1Q60847 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.55■□□□□ 0.4
Col12a1Q60847 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Col12a1Q60847 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.55■□□□□ 0.4
Col12a1Q60847 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.55■□□□□ 0.4
Col12a1Q60847 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.55■□□□□ 0.4
Col12a1Q60847 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col12a1Q60847 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Col12a1Q60847 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col12a1Q60847 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.54■□□□□ 0.4
Col12a1Q60847 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.54■□□□□ 0.4
Col12a1Q60847 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col12a1Q60847 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col12a1Q60847 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col12a1Q60847 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.54■□□□□ 0.4
Col12a1Q60847 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col12a1Q60847 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.54■□□□□ 0.4
Col12a1Q60847 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col12a1Q60847 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
Col12a1Q60847 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Gm18195-201ENSMUST00000207604 706 ntBASIC17.53■□□□□ 0.4
Col12a1Q60847 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Col12a1Q60847 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col12a1Q60847 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col12a1Q60847 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Auts2-212ENSMUST00000178555 309 ntBASIC17.52■□□□□ 0.4
Col12a1Q60847 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.52■□□□□ 0.4
Col12a1Q60847 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Il3ra-202ENSMUST00000223589 738 ntBASIC17.52■□□□□ 0.4
Col12a1Q60847 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col12a1Q60847 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col12a1Q60847 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col12a1Q60847 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col12a1Q60847 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col12a1Q60847 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.51■□□□□ 0.39
Col12a1Q60847 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col12a1Q60847 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col12a1Q60847 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col12a1Q60847 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col12a1Q60847 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col12a1Q60847 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col12a1Q60847 Grk6-206ENSMUST00000224995 2971 ntBASIC17.5■□□□□ 0.39
Col12a1Q60847 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col12a1Q60847 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col12a1Q60847 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.5■□□□□ 0.39
Col12a1Q60847 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.5■□□□□ 0.39
Col12a1Q60847 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col12a1Q60847 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms